PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067060.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family ERF
Protein Properties Length: 322aa    MW: 34116 Da    PI: 10.5742
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067060.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.56.8e-1897146255
               AP2   2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                       +y+GVr+++ +g++++eIrdp     + +r +lg+f+taeeAa+a++aa+ ++ g
  TRIDC5AG067060.3  97 RYRGVRQRR-WGKFASEIRDPI----QgRRLWLGTFDTAEEAAAAYDAAKIRISG 146
                       69****998.**********82....36*********************999876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    
AAGMESAAAA AAEAEAEAAE AQPRGRVVRI IVHDADATDS SSSEDESASP PLAPMPTTKE  60
ERRRERKKRR RVMEAGRRDD SGPPQPQATG ARTPSVRYRG VRQRRWGKFA SEIRDPIQGR  120
RLWLGTFDTA EEAAAAYDAA KIRISGSRRP ADGATGFPFS FPPPEPAKPT VLRLPMPQPA  180
KPTILRPPMP QPAKQITSPP PPPPPPEPAK PAISPPPLPA KPFALPLKLR LKLSFNAQVK  240
DKGWNCIAGE VKVEGGGCAG EVKVEGGGCA DGSKEAGSSS EVKAVKPMWA MITGKRKKRS  300
GCGTRVGALH ASSVCVEEVG GT
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
16371RRERKKRRR
26872KRRRV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G03800.11e-13ERF family protein