PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG067730.11
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family AP2
Protein Properties Length: 156aa    MW: 18067.2 Da    PI: 10.0593
Description AP2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG067730.11genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP256.85.4e-18958155
                AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                       s+y+GV++++++grW+++I+d      + k+++lg f+ta  Aa+a+++a+ k++g
  TRIDC5AG067730.11  9 SQYRGVTFYRRTGRWESHIWD------CgKQVYLGGFDTAHAAARAYDRAAIKFRG 58
                       78*******************......55************************998 PP
2AP229.32.1e-09101140144
                AP2   1 sgykGVrwdkkrgrWvAeIrdpseng...krkrfslgkfgtaeeAak 44 
                        s+y+GV+ +k  grW+A+       g    +k+++lg f+++ eAa+
  TRIDC5AG067730.11 101 SKYRGVTLHK-CGRWEAR---M---GqllGKKYIYLGLFDSEVEAAR 140
                        89********.7******...5...334336**********88*997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 156 aa     Download sequence    
RRGPRSRSSQ YRGVTFYRRT GRWESHIWDC GKQVYLGGFD TAHAAARAYD RAAIKFRGLE  60
ADINFNLSDY EEDLKQMRNW TKEEFVHILR RQSTGFARGS SKYRGVTLHK CGRWEARMGQ  120
LLGKKYIYLG LFDSEVEAAR GVRQGGDSLQ WEGSCD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36920.16e-78AP2 family protein