PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG069610.6
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 250aa    MW: 29667.2 Da    PI: 9.5961
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG069610.6genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.3e-083656526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                      +C  f++ G+C++Gd+C+F+H+
  TRIDC5AG069610.6 36 ICYAFQK-GECSRGDSCRFSHD 56
                      7******.*************7 PP
2zf-CCCH19.12.3e-066486326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++ ++C+F+H+
  TRIDC5AG069610.6 64 RGVCYAFQK-GECSRRASCRFSHD 86
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 250 aa     Download sequence    
DEQRNANTGW GSKEDDPKWE HDRHRGPQNK GESRGICYAF QKGECSRGDS CRFSHDEQVA  60
VQGRGVCYAF QKGECSRRAS CRFSHDEQRN ANTDRGSWED SNARRQHDHD PPKSHKNFPD  120
RNKEETRSGD RDGQSSRSEL HRDRDSRSRH GDRDTKDSDR NRHEKSPERS RGDRQRGDDR  180
GREDRSDTKD RDRNRHEKSP ERSRGDRQRG DDRGREDRSE SRRSRHDRDS GGRHERRGDE  240
EEERYRKSRR