PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG069610.7
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 247aa    MW: 29294.8 Da    PI: 9.9922
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG069610.7genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.31.3e-083353526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                      +C  f++ G+C++Gd+C+F+H+
  TRIDC5AG069610.7 33 ICYAFQK-GECSRGDSCRFSHD 53
                      7******.*************7 PP
2zf-CCCH19.12.3e-066183326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++ ++C+F+H+
  TRIDC5AG069610.7 61 RGVCYAFQK-GECSRRASCRFSHD 83
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    
RNANTGWGSK EDDPKWEHDR HRGPQNKGES RGICYAFQKG ECSRGDSCRF SHDEQVAVQG  60
RGVCYAFQKG ECSRRASCRF SHDEQRNANT DRGSWEDSNA RRQHDHDPPK SHKNFPDRNK  120
EETRSGDRDG QSSRSELHRD RDSRSRHGDR DTKDSDRNRH EKSPERSRGD RQRGDDRGRE  180
DRSDTKDRDR NRHEKSPERS RGDRQRGDDR GREDRSESRR SRHDRDSGGR HERRGDEEEE  240
RYRKSRR