PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG069610.8
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family C3H
Protein Properties Length: 260aa    MW: 28599.8 Da    PI: 8.2725
Description C3H family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG069610.8genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-CCCH26.21.4e-083050526
                      --SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  5 lCrffartGtCkyGdrCkFaHg 26
                      +C  f++ G+C++Gd+C+F+H+
  TRIDC5AG069610.8 30 ICYAFQK-GECSRGDSCRFSHD 50
                      7******.*************7 PP
2zf-CCCH192.4e-065880326
                      S---SGGGGTS--TTTTT-SS-SS CS
           zf-CCCH  3 telCrffartGtCkyGdrCkFaHg 26
                      +  C  f++ G+C++ ++C+F+H+
  TRIDC5AG069610.8 58 RGVCYAFQK-GECSRRASCRFSHD 80
                      567******.*************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
NTGWGSKEDD PKWEHDRHRG PQNKGESRGI CYAFQKGECS RGDSCRFSHD EQVAVQGRGV  60
CYAFQKGECS RRASCRFSHD EQFRGMQTLI EVLGRTAMQD GSMTTIHQRA TKISLTGIKK  120
RRDQGIGMVN PQDQSCTGTE ILGRDTAIET QKIVTGTGTR NPPRDQEVTG REAMTGEEKI  180
DQTQKIGTGT GMRNPLRDQE ATGREAMTGE EKIDQRADGL GTTETLVAVT KEGVTKRKNG  240
TGNHGDKTQG MHCRCCSSLG