PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG070490.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 215aa    MW: 22625.6 Da    PI: 10.5862
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG070490.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.45.9e-171461148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      rg+WT  Ede l+ ++k +G g+Wk ++ + g++R++k+c++rw++yl
  TRIDC5AG070490.2 14 RGAWTSKEDETLASYIKAHGEGRWKEVPLKAGLRRCGKSCRLRWLNYL 61
                      89********************************************97 PP
2Myb_DNA-binding521.6e-1667111147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ + +E+el+v+++++lG++ W++Ia +++ gRt++++k++w++ 
  TRIDC5AG070490.2  67 RGNISDDEEELIVRLHRLLGNR-WSLIAGRLP-GRTDNEIKNYWNST 111
                       7899******************.*********.***********986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 215 aa     Download sequence    
RMRRACSAKE GVKRGAWTSK EDETLASYIK AHGEGRWKEV PLKAGLRRCG KSCRLRWLNY  60
LRPSIKRGNI SDDEEELIVR LHRLLGNRWS LIAGRLPGRT DNEIKNYWNS TLGRKALPER  120
AATRVVATPC ASASSGSSTG ASTAGLSSNC GAGTSAKAAG LLSSASVWVP KPVRCTGGLF  180
LSGDAPLPAP VTQTRAVGGD GDECSGSSLA ASSGG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G13540.13e-56MYB family protein