PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG070820.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 676aa MW: 74949.6 Da PI: 6.2442

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG070820.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	87.2	1.4e-27	362	412	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC5AG070820.1 362 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 412 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 676 aa Download sequence
LGVVELVMTT QKINYNAEID NICNALKEVD LRGSDVSSDP RAQVVDTSYR AIVPEIAHVL 60 KAVCETHKLP LAQTWIPCVC QAKRASRHSD EKYKYCVSTV DEACYVGDPA MTGFHQACSE 120 HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI RLRSVKTGSM 180 DLILEFFLPN NCINSEEQGN MLNSLSNTIQ QASCTLRVVG VKELANDGSP ETSSPTPPEV 240 CDKPAEILDE LASGIDIPAR TTSVDASEEV SSWIASLVDV QNNAAQAETD CGLPFGFRKQ 300 EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK HEEYEAKGSP FSSDRSLSNS DKAIEKRRTK 360 IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT TLKRICRHHG IDRWPSRKIK KVGHSLKKLQ 420 MVIDSVHGAE GTVRLSSLYE NFTKTTWSER ELHGDLSYPA SEQKVQLEPS VPDRQCESRF 480 SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP QQQQSSAPQL AVKQEFFMEE NQSSTQMKAA 540 SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP MANMSGMQEA KPDSLKIKAM YGEERCIFRL 600 QPSWGFEKLK EEIAKRFGIS REIYDLKYLD DESEWVLLTC DADLLECIDV YKSSSAKTVR 660 ISVNPTVQPA LRGSFG

Sequence ? help Back to Top

Protein Sequence Length: 676 aa Download sequence

LGVVELVMTT QKINYNAEID NICNALKEVD LRGSDVSSDP RAQVVDTSYR AIVPEIAHVL  60
KAVCETHKLP LAQTWIPCVC QAKRASRHSD EKYKYCVSTV DEACYVGDPA MTGFHQACSE  120
HHLFRGEGVV GTALGTNEPC FCPDITAYSK VQYPLSHYAK LFGLRAAVAI RLRSVKTGSM  180
DLILEFFLPN NCINSEEQGN MLNSLSNTIQ QASCTLRVVG VKELANDGSP ETSSPTPPEV  240
CDKPAEILDE LASGIDIPAR TTSVDASEEV SSWIASLVDV QNNAAQAETD CGLPFGFRKQ  300
EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK HEEYEAKGSP FSSDRSLSNS DKAIEKRRTK  360
IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT TLKRICRHHG IDRWPSRKIK KVGHSLKKLQ  420
MVIDSVHGAE GTVRLSSLYE NFTKTTWSER ELHGDLSYPA SEQKVQLEPS VPDRQCESRF  480
SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP QQQQSSAPQL AVKQEFFMEE NQSSTQMKAA  540
SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP MANMSGMQEA KPDSLKIKAM YGEERCIFRL  600
QPSWGFEKLK EEIAKRFGIS REIYDLKYLD DESEWVLLTC DADLLECIDV YKSSSAKTVR  660
ISVNPTVQPA LRGSFG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	1e-155	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG070820.1