PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG070820.9

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

Nin-like

Protein Properties

Length: 880aa MW: 97521.8 Da PI: 5.5077

Description

Nin-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG070820.9	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	RWP-RK	86.7	2e-27	572	622	2	52
RWP-RK 2 ekeisledlskyFslpikdAAkeLgvclTvLKriCRqyGIkRWPhRkiksl 52 ek++sl++l+k+F++++k+AAk+Lgvc+T+LKriCR++GI+RWP+Rkik++ TRIDC5AG070820.9 572 EKTVSLQELRKHFAGSLKEAAKNLGVCPTTLKRICRHHGIDRWPSRKIKKV 622 689**********************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 880 aa Download sequence
MRAGMDELDL MEEFLLASPG PDFPEFLHPG GASPSPFSPL FDLGSTITTA PAGGGDDDGE 60 DGDDESRRAW LIQPQEAPAS VKERLGRALQ GIASRSRGAA GELLVQVWVP TRIGDRQVLT 120 TCGQPFWLDR RSDRLESYRT VSVKYQFSAD ETSCAELGLP GRVFVGRVPE WTPDVRLFTD 180 NEYPRVRYAQ HFDIRGSVAM PVFERRTGAC LGVVELVMTT QKINYNAEID NICNALKEVD 240 LRGSDVSSDP RAQVVDTSYR AIVPEIAHVL KAVCETHKLP LAQTWIPCVC QAKRASRHSD 300 EKYKYCVSTV DEACYVGDPA MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK 360 VQYPLSHYAK LFGLRAAVAI RLRSVKTGSM DLILEFFLPN NCINSEEQGN MLNSLSNTIQ 420 QASCTLRVVG VKELANDGSP ETSSPTPPEV CDKPAEILDE LASGIDIPAR TTSVDASEEV 480 SSWIASLVDV QNNAAQAETD CGLPFGFRKQ EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK 540 HEEYEAKGSP FSSDRSLSNS DKAIEKRRTK IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT 600 TLKRICRHHG IDRWPSRKIK KVGHSLKKLQ MVIDSVHGAE GTVRLSSLYE NFTKTTWSER 660 ELHGDLSYPA SEQKVQLEPS VPDRQCESRF SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP 720 QQQQSSAPQL AVKQEFFMEE NQSSTQMKAA SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP 780 MANMSGMQEA KPDSLKIKAM YGEERCIFRL QPSWGFEKLK EEIAKRFGIS REIYDLKYLD 840 DESEWVLLTC DADLLECIDV YKSSSAKTVR ISVNPTVQPT

Sequence ? help Back to Top

Protein Sequence Length: 880 aa Download sequence

MRAGMDELDL MEEFLLASPG PDFPEFLHPG GASPSPFSPL FDLGSTITTA PAGGGDDDGE  60
DGDDESRRAW LIQPQEAPAS VKERLGRALQ GIASRSRGAA GELLVQVWVP TRIGDRQVLT  120
TCGQPFWLDR RSDRLESYRT VSVKYQFSAD ETSCAELGLP GRVFVGRVPE WTPDVRLFTD  180
NEYPRVRYAQ HFDIRGSVAM PVFERRTGAC LGVVELVMTT QKINYNAEID NICNALKEVD  240
LRGSDVSSDP RAQVVDTSYR AIVPEIAHVL KAVCETHKLP LAQTWIPCVC QAKRASRHSD  300
EKYKYCVSTV DEACYVGDPA MTGFHQACSE HHLFRGEGVV GTALGTNEPC FCPDITAYSK  360
VQYPLSHYAK LFGLRAAVAI RLRSVKTGSM DLILEFFLPN NCINSEEQGN MLNSLSNTIQ  420
QASCTLRVVG VKELANDGSP ETSSPTPPEV CDKPAEILDE LASGIDIPAR TTSVDASEEV  480
SSWIASLVDV QNNAAQAETD CGLPFGFRKQ EDEGFSVTAG WPTSPVLVPE DKSFFPGFKK  540
HEEYEAKGSP FSSDRSLSNS DKAIEKRRTK IEKTVSLQEL RKHFAGSLKE AAKNLGVCPT  600
TLKRICRHHG IDRWPSRKIK KVGHSLKKLQ MVIDSVHGAE GTVRLSSLYE NFTKTTWSER  660
ELHGDLSYPA SEQKVQLEPS VPDRQCESRF SPHTSGSNSL SPTYSQSSNS SLGCSSDPKP  720
QQQQSSAPQL AVKQEFFMEE NQSSTQMKAA SHDELQLFTE EKPVTLCRSQ SHMLFSEHKP  780
MANMSGMQEA KPDSLKIKAM YGEERCIFRL QPSWGFEKLK EEIAKRFGIS REIYDLKYLD  840
DESEWVLLTC DADLLECIDV YKSSSAKTVR ISVNPTVQPT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35270.1	0.0	Nin-like family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG070820.9