PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG071610.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family FAR1
Protein Properties Length: 268aa    MW: 29671.4 Da    PI: 6.8591
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG071610.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR140.87.3e-13144224191
              FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                       +fYn Y+ e GF +r  ks+ +  ++   +++ vC ++gk+  e+++         + r++C a +++ + +d+ w++++ +  HnH+l p
  TRIDC5AG071610.1 144 DFYNLYSWEKGFGIRYGKSRLN-VERVKCMQEIVCGCSGKAGVENTR---------SCRCECPALIRLLQAEDNAWYIAEHRDTHNHSLLP 224
                       6*****************9998.5556788999****9999886555.........99******************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
RGSTFLEEVG ESLVPDPVVA GAVDAEMVLQ QSLVAPETEG HQLRAEGQPA ATGEGQILMR  60
SAAVEEMRDV SPPSSELSTG KMNPRAPGWN KRLRIGAAAP SRPPCPNRVS AFERAVRNYA  120
ENPRDNVVTP TIGTTFDSVG EAYDFYNLYS WEKGFGIRYG KSRLNVERVK CMQEIVCGCS  180
GKAGVENTRS CRCECPALIR LLQAEDNAWY IAEHRDTHNH SLLPNFGETL HWPSHKHIDV  240
YTRDLVKQLR QNNVNLAKVY SIIGAFFG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G06250.11e-10FAR1 family protein