PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG071690.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bHLH

Protein Properties

Length: 353aa MW: 37970.4 Da PI: 4.7185

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG071690.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	36.2	1.1e-11	184	226	7	54
HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 ++ErrRR+r+N++++ Lr+++Pk +K++ +iL +++Y+++L TRIDC5AG071690.2 184 MAERRRRKRLNDRLSMLRSIVPKI-----TKMDRTSILGDTIDYVNEL 226 89*******************7.....6*************998 PP

Sequence ? help Back to Top
Protein Sequence Length: 353 aa Download sequence
MDQLDEQSFL DELMSLRREE ALPPAPAPWQ AYPGSGMMTT SDLLFYGGEG AEASSGTDMA 60 GPFLQQPMAP PPSAPPHRSH EEFNFDCLSE VCNPYRSCVG GVHGHGVVHA AGQALAQYPL 120 HDAMAEDDPS GSNLHRGGGA SSSSVPFVFG AGGARESPEI IRGVFPGAHA RSKLNGGTTS 180 KNLMAERRRR KRLNDRLSML RSIVPKITKM DRTSILGDTI DYVNELTERI KTLEEEIGST 240 PEELNLLNTR KNFSSGSSEE MPTRNSTNFV IEKQGDGETR IDICCATSPG ALISTVSALE 300 VLGLEIEQCV VSCFGDFAMQ ASCSQEEGRS QVTSTDEIKQ ALFTSAGYGG RCL

Sequence ? help Back to Top

Protein Sequence Length: 353 aa Download sequence

MDQLDEQSFL DELMSLRREE ALPPAPAPWQ AYPGSGMMTT SDLLFYGGEG AEASSGTDMA  60
GPFLQQPMAP PPSAPPHRSH EEFNFDCLSE VCNPYRSCVG GVHGHGVVHA AGQALAQYPL  120
HDAMAEDDPS GSNLHRGGGA SSSSVPFVFG AGGARESPEI IRGVFPGAHA RSKLNGGTTS  180
KNLMAERRRR KRLNDRLSML RSIVPKITKM DRTSILGDTI DYVNELTERI KTLEEEIGST  240
PEELNLLNTR KNFSSGSSEE MPTRNSTNFV IEKQGDGETR IDICCATSPG ALISTVSALE  300
VLGLEIEQCV VSCFGDFAMQ ASCSQEEGRS QVTSTDEIKQ ALFTSAGYGG RCL

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	186	193	ERRRRKRL

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G65640.1	2e-57	bHLH family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG071690.2