PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG071700.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 262aa    MW: 28555.5 Da    PI: 7.0514
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG071700.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH36.87.1e-1280122754
                       HHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+r+N++++ Lr+++Pk      +K++  +iL  +++Y+++L
  TRIDC5AG071700.1  80 MAERRRRKRLNDRLSMLRSIVPKI-----TKMDRTSILGDTIDYVNEL 122
                       89*********************7.....6***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 262 aa     Download sequence    
GPGVVHGVGQ SLAQYPLHDA MAENGTSGSK LHHGGGGSSS SPPFVFAGVA GEGSEMTRGV  60
FSGAHPRSKL NGGTTSKNLM AERRRRKRLN DRLSMLRSIV PKITKMDRTS ILGDTIDYVN  120
ELTERIKTLE EEIGSTPEEL NLLNTRKNFS GVSSEEMPMR NSTKFVIEKQ VDGETRIDIC  180
CATSPGVLIS TVSALDVLGL EIEQCVVSCF GDLVMQASCS QVRNYRVSFF GGAKFSINFL  240
AECTCFLHYY NSIIDAWCLW CI
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
18289ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G65640.16e-48bHLH family protein