PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG071710.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 193aa    MW: 21197 Da    PI: 7.1297
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG071710.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.43.9e-11105147754
                       HHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
               HLH   7 erErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                       ++ErrRR+r+N++++ Lr+++Pk        K++  +iL  +++Y+++L
  TRIDC5AG071710.3 105 MAERRRRKRLNDRLSMLRSIVPKiI------KMDRTSILGDTIDYVNEL 147
                       89*********************55......***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 193 aa     Download sequence    
HEEFNFDCLI EVCNSYRSCA GVVLGPGVVH GAGQALAQDP LHDAMAEDDP SGGNLHRGGG  60
SSSSPVPFIF GAGGAGESSE MTRGVFSGAH PRSKLNGGTT SKNLMAERRR RKRLNDRLSM  120
LRSIVPKIIK MDRTSILGDT IDYVNELTER IKTLEEEIGA TPEELNLLNT SKFEVYMFFH  180
LRETKKRNLF IVS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107114ERRRRKRL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G10570.17e-21bHLH family protein