PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG071930.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 263aa    MW: 28299.1 Da    PI: 8.0381
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG071930.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.51.6e-10101148355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + h ++Er+RR+++ + f  L +++P +     kK +K + L  +++Y+k+L+
  TRIDC5AG071930.2 101 QEHVIAERKRREKLQQQFVSLATIVPGL-----KKTDKLSLLGSTIDYVKNLE 148
                       5799************************.....9****************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    
PPLPGHEEQC YTPPMATPAF NPSCSSNFPS FAGSSSLPNL PFGSAMVKNE LGQPSPPPSS  60
NFLSFGAGQA STLNFSGWQR DRVQGTMQQL QAPERRGRAP QEHVIAERKR REKLQQQFVS  120
LATIVPGLKK TDKLSLLGST IDYVKNLEEK VKALEQGSRR SSESMVFDSK CCISAPNNDA  180
AGPSGSRSGS GYSSPDIEAS IRGNTALLNI CCKKRRGVLV MILSELENQG LSIINTNVIP  240
FTDSCLNITI TIEEGVLSAV ELV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1107112ERKRRE
2108113RKRREK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.16e-29bHLH family protein