PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG072100.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 611aa    MW: 68644.2 Da    PI: 6.6055
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG072100.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS3121.3e-952306012373
              GRAS   2 velLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfs 94 
                       ++lL++cAeav s+d + a +lL+r++ ++sp+gd+ qRla+yft++L+arla+++s+ly++l  ++ts   + e + a++l   vs  +k++
  TRIDC5AG072100.2 230 ETLLTRCAEAVVSNDVRGAGKLLERIKCHSSPTGDARQRLAHYFTQGLEARLAGTGSRLYRSLMGKRTS---VLELIRAFHLHTAVSCSIKVG 319
                       689************************************************************999999...9******************** PP

              GRAS  95 hltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakr 185
                        l   ++I++av+g +++Hi+ ++++ G+QWp Ll+ La+R++gpp++RiTg++ p +g      ++e g+rL + A+++gvpf+f++ +a++
  TRIDC5AG072100.2 320 LLFSTNTIYKAVAGRRKLHIVHYGMTTGFQWPDLLRLLANREGGPPEVRITGINTPLPGpcPDALMQEAGHRLDNCASQFGVPFKFHA-IASK 411
                       ********************************************************9999899999**********************.79** PP

              GRAS 186 ledleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                        ed++ e+L+++p+E+l+V++ ++  +l+des++ +   +rd vLk++++++P v++ +  +  ++++ F++rf +al+y++alfd +e+++p
  TRIDC5AG072100.2 412 PEDVRAEDLHIDPDEVLVVSSLYEFRTLMDESLTFDMvsPRDMVLKTIRKMRPSVFISSVVNGPYGAAFFMTRFRHALYYFTALFDVMETTVP 504
                       *******************************98765555****************************************************** PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                        + ++r  vEr +l+r++ n++aceg++r+er +++++W++r ++aG++++pl+ +++   +  +++ + + +++ e++ +l++gWk+r L++
  TRIDC5AG072100.2 505 WDGDKRLLVERDILARSAINMIACEGTDRVERPQNYKEWQARNQRAGLRQLPLDPDIVLMLRDEVKNRYHKHFMISEDHRWLLQGWKGRVLYA 597
                       ********************************************************************9999********************* PP

              GRAS 370 vSaW 373
                        S W
  TRIDC5AG072100.2 598 HSTW 601
                       **** PP
Sequence ? help Back to Top
Protein Sequence    Length: 611 aa     Download sequence    
TTHGDSQNDL ALEYISRMLT EEDIVDKFFY QYPDHPKLLQ AEQPFAEILA DTSSSAAQES  60
FASSTSILTV MVSGCQVQDP VFFLNGTGTV EPNSMVFPSE SSTSMNMLSS MEFFKGMEEA  120
NMFLPTDDVM VDGRGRKKRS GMDGEAEAGL GRSSKQIVVL LHSTTTLEEE EATALEMLDR  180
LILNGYEACP SEMQEVVRVT WEDKENKAAR QSISRRGRRG ARHTVVTDLE TLLTRCAEAV  240
VSNDVRGAGK LLERIKCHSS PTGDARQRLA HYFTQGLEAR LAGTGSRLYR SLMGKRTSVL  300
ELIRAFHLHT AVSCSIKVGL LFSTNTIYKA VAGRRKLHIV HYGMTTGFQW PDLLRLLANR  360
EGGPPEVRIT GINTPLPGPC PDALMQEAGH RLDNCASQFG VPFKFHAIAS KPEDVRAEDL  420
HIDPDEVLVV SSLYEFRTLM DESLTFDMVS PRDMVLKTIR KMRPSVFISS VVNGPYGAAF  480
FMTRFRHALY YFTALFDVME TTVPWDGDKR LLVERDILAR SAINMIACEG TDRVERPQNY  540
KEWQARNQRA GLRQLPLDPD IVLMLRDEVK NRYHKHFMIS EDHRWLLQGW KGRVLYAHST  600
WAAADATGSP V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.11e-118GRAS family protein