PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG072110.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 150aa    MW: 16741.3 Da    PI: 6.9577
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG072110.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS129.73.2e-40515097239
              GRAS  97 taNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrle 187
                          ++I++av+g +++Hi+ ++is G+QWp Ll+ La+R++gpp++RiTg++ p++g   +  +ee g+rL+++A+++gvpf+f++ +a++le
  TRIDC5AG072110.1   5 FSTNTIYKAVAGRRKLHIVHYGISTGFQWPDLLRLLANREGGPPEVRITGINTPQPGpcPAALMEEAGHRLNNYASQFGVPFKFRA-IASKLE 96 
                       56789****************************************************999999***********************.7***** PP

              GRAS 188 dleleeLrvkpgEalaVnlvlqlhrlldesvsles..erdevLklvkslsPkvv 239
                       d++ e+L+++p+E+l+V++ ++  +l+des++++   +rd vL+++ +++P v+
  TRIDC5AG072110.1  97 DVRAEDLHIDPDEVLVVSSLYEFRTLMDESLTSDMlsPRDMVLNTISKMRPSVF 150
                       *****************************99887666**************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 150 aa     Download sequence    
VGLLFSTNTI YKAVAGRRKL HIVHYGISTG FQWPDLLRLL ANREGGPPEV RITGINTPQP  60
GPCPAALMEE AGHRLNNYAS QFGVPFKFRA IASKLEDVRA EDLHIDPDEV LVVSSLYEFR  120
TLMDESLTSD MLSPRDMVLN TISKMRPSVF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G07530.12e-38GRAS family protein