PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG073040.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 245aa    MW: 26826.4 Da    PI: 6.9397
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG073040.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS163.32e-502203178373
              GRAS 178 fnvlvakrledleleeLrvkpgEalaVnlvlqlhrll....desvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysa 266
                       f+ ++ ++l++l++++++v pgEa+aVn++ qlhrll    + s+sl+ ++d vL  + s++P+v++vveqeadhn++++++rf +a+ yy +
  TRIDC5AG073040.1   2 FQRVTDDSLDQLQPWMFQVLPGEAVAVNSICQLHRLLvnpdAASTSLPTPIDVVLGWIASMQPRVFTVVEQEADHNKPRLVTRFDNAMFYYGS 94 
                       7888889*****************************96666566777779******************************************* PP

              GRAS 267 lfdsl.eaklpres.eerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgs 357
                       ++ds+ +++++r     +     ++++rei n+v+ eg++r+erhe l+ W +rl + G++ vpl+ +aa qa   +r +++ g+rv+e  g+
  TRIDC5AG073040.1  95 VLDSMeAMSVSRGGaIGNGAGADAYVQREIFNIVCYEGSARTERHEPLAYWCARLWRTGLTHVPLGPSAAYQAAKFVRVFSGTGFRVQEIGGC 187
                       *****66677776654455566778******************************************************************** PP

              GRAS 358 lvlgWkdrpLvsvSaW 373
                       l l W+d+pL++vS+W
  TRIDC5AG073040.1 188 LSLAWHDHPLFTVSVW 203
                       **************** PP
Sequence ? help Back to Top
Protein Sequence    Length: 245 aa     Download sequence    
SFQRVTDDSL DQLQPWMFQV LPGEAVAVNS ICQLHRLLVN PDAASTSLPT PIDVVLGWIA  60
SMQPRVFTVV EQEADHNKPR LVTRFDNAMF YYGSVLDSME AMSVSRGGAI GNGAGADAYV  120
QREIFNIVCY EGSARTERHE PLAYWCARLW RTGLTHVPLG PSAAYQAAKF VRVFSGTGFR  180
VQEIGGCLSL AWHDHPLFTV SVWSAMPADG AGTAKEHADK HKLKMSIGES SGAATCQTPR  240
RSERA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G01570.12e-41GRAS family protein