PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG073160.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MYB
Protein Properties Length: 246aa    MW: 28250.7 Da    PI: 6.7869
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG073160.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding51.32.6e-161562148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
   Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                      +g+WT+ Ed ll ++v+q G g+W+++a+  g++R++k+c++rw +yl
  TRIDC5AG073160.1 15 KGPWTALEDRLLTEYVQQQGEGSWNSVAKLTGLRRSGKSCRLRWVNYL 62
                      79********************************************97 PP
2Myb_DNA-binding52.11.5e-1668112147
                       TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
   Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                       rg+ T++E+  +++++++lG++ W++Iar+++ gRt++++k++w+++
  TRIDC5AG073160.1  68 RGKITADEETVILQLHAMLGNR-WSAIARCLP-GRTDNEIKNYWRTH 112
                       8999******************.*********.************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 246 aa     Download sequence    
MDAMSSAVLQ GAWRKGPWTA LEDRLLTEYV QQQGEGSWNS VAKLTGLRRS GKSCRLRWVN  60
YLRPDLKRGK ITADEETVIL QLHAMLGNRW SAIARCLPGR TDNEIKNYWR THFKKARPSR  120
RARAQLLHQY QLQQQQQHRQ YLHALHLLQQ QQQEMQMQLQ ENHHHQQQQQ VMMMQQQSPP  180
EEDQAVITTG DNMNSMETAG CYCPCPAASA VLDLPLPADD EDALWDSLWR LVDGEDGSSG  240
GDSGEY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.13e-58MYB family protein