PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073410.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

TALE

Protein Properties

Length: 220aa MW: 25582 Da PI: 7.0269

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073410.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	24.4	5.1e-08	169	202	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp+++++++L +++gL+ +q+ +WF N+R + TRIDC5AG073410.5 169 KWPYPTEDDKAKLVEETGLQLKQINNWFINQRKR 202 579*****************************87 PP
2	ELK	28.3	3.9e-10	123	144	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELK +L++++++++g++++E++ TRIDC5AG073410.5 123 ELKIELKQGFKSRIGDVREEIL 144 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
HSYAAHHRPF LSPHDKQELD SFLAQYLMLL CSFREQLQQH VRVHAVEAVM ACREIEQSLQ 60 DLTGASLEEG TGATMSEDED EGPPMIMEAA PMDMSSNGHD MMGFGPLVPT DTERSLMERV 120 RQELKIELKQ GFKSRIGDVR EEILRKRRAG KLPGDTTTIL KQWWQEHAKW PYPTEDDKAK 180 LVEETGLQLK QINNWFINQR KRNWHNNSQT STLKSKRKRW

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	200	219	RKRNWHNNSQTSTLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62990.1	1e-120	TALE family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073410.5