PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073450.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

LBD

Protein Properties

Length: 59aa MW: 6694.64 Da PI: 9.0084

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073450.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	68.4	1.6e-21	12	58	1	47
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllk 47 +CaaCk+lrr+Ca+dCvlapyfpa++p+++a vh++FGasnv +ll+ TRIDC5AG073450.1 12 RCAACKYLRRRCAHDCVLAPYFPASHPHRYASVHRVFGASNVARLLQ 58 6******************************************9987 PP

Sequence ? help Back to Top
Protein Sequence Length: 59 aa Download sequence
MHEEDQEGGG RRCAACKYLR RRCAHDCVLA PYFPASHPHR YASVHRVFGA SNVARLLQV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G31320.1	8e-23	LBD family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073450.1