PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG073450.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family LBD
Protein Properties Length: 175aa    MW: 19200.6 Da    PI: 4.8679
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG073450.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260126.21.5e-39181181101
            DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkae 93 
                       +CaaCk+lrr+Ca+dCvlapyfpa++p+++a vh++FGasnv +ll++lp +er +a++++++eA++r++dPvyG++g+i++lq++++ ++ e
  TRIDC5AG073450.2  18 RCAACKYLRRRCAHDCVLAPYFPASHPHRYASVHRVFGASNVARLLQSLPVDERAQAAETMAMEAQWRVEDPVYGCTGIISQLQEEIQATQCE 110
                       6******************************************************************************************** PP

            DUF260  94 lallkeel 101
                       la+++++l
  TRIDC5AG073450.2 111 LARTRAQL 118
                       **999875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    
GDVEVEMHEE DQEGGGRRCA ACKYLRRRCA HDCVLAPYFP ASHPHRYASV HRVFGASNVA  60
RLLQSLPVDE RAQAAETMAM EAQWRVEDPV YGCTGIISQL QEEIQATQCE LARTRAQLAI  120
VPAHGAQLQG STVALPPPPQ PQRDDGHRVP ISQMQGLGEA VPLLDPDEFL DLDGI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26660.18e-40LBD family protein