PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073470.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 156aa MW: 17738.6 Da PI: 10.3471

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073470.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	90.6	7.9e-29	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye++s TRIDC5AG073470.1 9 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 59 79***********************************************86 PP
2	K-box	46.7	1.4e-16	81	155	9	83
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkk 83 + +++ e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++k TRIDC5AG073470.1 81 TVQQDIEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLELKIEKSLLGIRAVKTRRFEEQLSTLRQK 155 55678899999**************************************************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 156 aa Download sequence
MVRGKTQMKR IENPTSRQVT FSKRRGGLLK KAFELSVLCD AEVALVVFSP RGRLYEFASS 60 SMKNTIERYK TVTKDNISRQ TVQQDIEKIK ADAEGLSKKL DALEACKSKL LGQNLEECSI 120 EELQSLELKI EKSLLGIRAV KTRRFEEQLS TLRQKG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	1e-64	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073470.1