PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073470.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 261aa MW: 29228.6 Da PI: 10.2843

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073470.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.3	2e-28	50	100	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye++s TRIDC5AG073470.3 50 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 100 79***********************************************86 PP
2	K-box	55.8	2e-19	122	212	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke +l+++n++L ++ + TRIDC5AG073470.3 122 TVQQDIEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLELKIEKSLLGIRAVKTRRFEEQLSTLRQKETKLRQDNEELYSQCQ 212 5567889999****************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 261 aa Download sequence
VLARSPSSSR RLIGGGRFFW FGWVFDRICG GRRGEKRRGA KMVRGKTQMK RIENPTSRQV 60 TFSKRRGGLL KKAFELSVLC DAEVALVVFS PRGRLYEFAS SSMKNTIERY KTVTKDNISR 120 QTVQQDIEKI KADAEGLSKK LDALEACKSK LLGQNLEECS IEELQSLELK IEKSLLGIRA 180 VKTRRFEEQL STLRQKETKL RQDNEELYSQ CQKEQHLALA APPAPATLAA PPAPATLAEQ 240 SQDVVDVETD LFLGLPGTGR S

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	8e-66	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073470.3