PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG073470.4

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MIKC_MADS

Protein Properties

Length: 220aa MW: 24563.2 Da PI: 8.9138

Description

MIKC_MADS family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG073470.4	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	SRF-TF	89.7	1.5e-28	9	59	1	51
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien + rqvtfskRr g+lKKA+ELSvLCdaeva+++fs++g+lye++s TRIDC5AG073470.4 9 KRIENPTSRQVTFSKRRGGLLKKAFELSVLCDAEVALVVFSPRGRLYEFAS 59 79***********************************************86 PP
2	K-box	56.3	1.3e-19	81	171	9	99
K-box 9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 + +++ e+ + +++ L k+++ L+ + +llG++Le++s++eLq+Le ++eksl iR+ K++ + eq+++l++ke +l+++n++L ++ + TRIDC5AG073470.4 81 TVQQDIEKIKADAEGLSKKLDALEACKSKLLGQNLEECSIEELQSLELKIEKSLLGIRAVKTRRFEEQLSTLRQKETKLRQDNEELYSQCQ 171 5567889999****************************************************************************98875 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MVRGKTQMKR IENPTSRQVT FSKRRGGLLK KAFELSVLCD AEVALVVFSP RGRLYEFASS 60 SMKNTIERYK TVTKDNISRQ TVQQDIEKIK ADAEGLSKKL DALEACKSKL LGQNLEECSI 120 EELQSLELKI EKSLLGIRAV KTRRFEEQLS TLRQKETKLR QDNEELYSQC QKEQHLALAA 180 PPAPATLAAP PAPATLAEQS QDVVDVETDL FLGLPGTGRS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G45660.1	3e-66	MIKC_MADS family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG073470.4