PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG073970.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 214aa    MW: 24180.1 Da    PI: 10.4049
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG073970.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF76.81.7e-2462111251
                       ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF   2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 
                       rie+ + rqv fskRr g++KKA+EL  LCdaeva+++fs+ g+lyey+s
  TRIDC5AG073970.2  62 RIEDRTSRQVRFSKRRSGLFKKAFELGLLCDAEVALLVFSPAGRLYEYAS 111
                       8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
HACSLVWWFV NLMEDPVPSL SLIFARSPHH PLQSSRDVRQ RASGNRRRRR AMARRGPVEL  60
RRIEDRTSRQ VRFSKRRSGL FKKAFELGLL CDAEVALLVF SPAGRLYEYA SSSIEDTYDR  120
YQAFGGAGKN LNEGGASTNN DKDPSNIQSR LKEIASWSLQ NNADDSDANE LEKLEKLLTD  180
ALENTKSKKM LAQRNRGARG GNSISPREQE EGRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.17e-29MIKC_MADS family protein