PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG073970.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 148aa    MW: 16037.5 Da    PI: 4.5245
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG073970.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF31.22.7e-102272651
                      HHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF 26 ELSvLCdaevaviifsstgklyeyss 51
                      EL  LCdaeva+++fs+ g+lyey+s
  TRIDC5AG073970.5  2 ELGLLCDAEVALLVFSPAGRLYEYAS 27
                      9***********************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 148 aa     Download sequence    
FELGLLCDAE VALLVFSPAG RLYEYASSSI EDTYDRYQAF GGAGKNLNEG GASTNNDKDP  60
SNIQSRLKEI ASWSLQNNAD DSDANELEKL EKLLTDALEN TKSKKVHLNG SVDISNRPFV  120
AKNQVSGSCN PVAPLSHQEN GSVFGHFN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G22950.15e-15MIKC_MADS family protein