PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG075600.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 214aa    MW: 23308.5 Da    PI: 8.0194
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG075600.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH33.85.9e-112066455
                      HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH  4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
                      ++ ++Er RR+ +N+++  Lr+++P+      +K++Ka+i + A+ YI +Lq
  TRIDC5AG075600.1 20 KNIINERHRRRMLNEKLYALRRVVPNI-----TKMDKASIIQDAIAYIEELQ 66
                      57799*********************7.....7******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    
TSSPDGATSR STKASSLERK NIINERHRRR MLNEKLYALR RVVPNITKMD KASIIQDAIA  60
YIEELQEQER QILAALRTDS CTAVAKVDDA ASTGSNAEDH GVGSSPRKKM RRTTSASSIN  120
GAFCSPSTHP VQIFELEVTQ VAEELTMVSM RHGNSHNAIA KVCEALESLC LKIISTSITA  180
VASGIVHNMF VEAEGMHGAQ TIKEMIQTHS AISM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.17e-33bHLH family protein