PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5AG075750.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

MYB

Protein Properties

Length: 220aa MW: 23877.6 Da PI: 6.0266

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5AG075750.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	37.8	4.6e-12	14	62	1	48
TSSS-HHHHHHHHHHHHHTTTT.-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg.tWktIartmgkgRtlkqcksrwqkyl 48 rg+W+ eEd +l v+++ + +W t +++ g++R++k+c++rw++yl TRIDC5AG075750.1 14 RGAWSREEDAILTGFVQRFANAgNWMTLPHKAGLNRCGKSCRLRWLNYL 62 89****************999**********************97 PP
2	Myb_DNA-binding	45.6	1.7e-14	69	111	2	46
SSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqk 46 g +T eEd l++ + + G++ W+ Ia++++ gRt++++k++w++ TRIDC5AG075750.1 69 GQFTDEEDSLILSLYADIGSK-WSVIAAKLP-GRTDNDVKNHWNT 111 78*****************.*****.*********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 220 aa Download sequence
MGRSPCCDRR SVKRGAWSRE EDAILTGFVQ RFANAGNWMT LPHKAGLNRC GKSCRLRWLN 60 YLRPALRHGQ FTDEEDSLIL SLYADIGSKW SVIAAKLPGR TDNDVKNHWN TKLKKRHLLA 120 MAPSPTPPTP ATDSPSASDA DESSLPPPPL DEEALATVDD GGELKHRSEE LYAELMGLIQ 180 QQPMTGDVRS SSSSSLSSTP TAGASSAGVS SAAWSVDDEE

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G36890.1	3e-60	MYB family protein

Link Out ? help Back to Top
Ensembl	TRIDC5AG075750.1