PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG075850.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family GRAS
Protein Properties Length: 637aa    MW: 67226.4 Da    PI: 6.4299
Description GRAS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG075850.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GRAS305.61.1e-932766362374
              GRAS   2 velLlecAeavssgdlelaqalLarlsel...aspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPil 91 
                       v++L+e+A+ v++gd+  a+++Larl+++   a  +g+p+ R a+yf+eAL+  l  ++ + ++a  +s+    ++  +l a+k+fse+sP+l
  TRIDC5AG075850.1 276 VDQLTEAARLVEAGDAYGAREILARLNHRlpaAPAAGTPLLRSAFYFKEALSVALDTTGAHASSAAVASTP--VDVLLKLGAYKAFSELSPVL 366
                       689*************************999455566********************77777776655555..5799**************** PP

              GRAS  92 kfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfefnvlvak 184
                       +f+h+t+ qa+l+++ g+ ++H++Dfdi+ G QW++L+q+La+R+   + l++T+++ p++++  el+ ++e+La+fA+elgvpf+f v+   
  TRIDC5AG075850.1 367 QFAHFTCVQAVLDELGGAGCIHVLDFDIGVGEQWASLMQELAQRRP-GAALKVTALVLPSTHHPLELQLIHENLANFAAELGVPFQFVVF--- 455
                       *******************************************965.589**************************************98... PP

              GRAS 185 rledleleeL.rvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklp 276
                       +l+++++ eL ++  g+a+aV+l +   +      +     ++vL+lv++l +k+v+ v++  d+++ +F++++l+a++ ++ l++sl+a  +
  TRIDC5AG075850.1 456 NLDSVDPTELlAIAGGDAIAVHLPVGSVHAA----A----VPSVLHLVRRLGAKLVISVDRSGDRGELPFAAHLLQAFQSCAFLLESLDAV-G 539
                       899998877637777**********998887....4....456*********************************************998.7 PP

              GRAS 277 reseerikvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvs 369
                       +e + ++k+Er+l++++i+++v+ ++++  +   +l  Wr ++++aGF pv++s++a++qa++ll+kv+++g+rve++ gslvl W++ +Lvs
  TRIDC5AG075850.1 540 TEPDVASKIERFLIQPKIESCVMRRHQA-AAAGDKLLPWRTMFTSAGFVPVHISNFAEAQADSLLKKVPVRGFRVEKRAGSLVLHWQRAELVS 631
                       888************************9.888889********************************************************** PP

              GRAS 370 vSaWr 374
                       vSaWr
  TRIDC5AG075850.1 632 VSAWR 636
                       ****8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 637 aa     Download sequence    
MPTQQLTTFQ LLPPAHAHGD RRQHHHQQLA CGGGLWDPAS VLDRRASPAA HPTLSSPSPL  60
PAGVAALAKN VSAAPPAQAQ AWPPPPPGPG ANDDDAKDDW VHHLPPLDMA GWGDPHAAAM  120
QEPHPPPSSQ DSTFLRWIIG GGDDDDDDSG AAMDGTDPPD LDLDRITMLP RHPPPLMGGA  180
GHGLPFTLAG EDTKQPFRAS PGAALHQQQH HLPHAFHGGA FPSFDPAAPA KRQQQQHPMA  240
GAAPPKLPPF AGHGAAAALK PKAEAPVDDG AAAAAVDQLT EAARLVEAGD AYGAREILAR  300
LNHRLPAAPA AGTPLLRSAF YFKEALSVAL DTTGAHASSA AVASTPVDVL LKLGAYKAFS  360
ELSPVLQFAH FTCVQAVLDE LGGAGCIHVL DFDIGVGEQW ASLMQELAQR RPGAALKVTA  420
LVLPSTHHPL ELQLIHENLA NFAAELGVPF QFVVFNLDSV DPTELLAIAG GDAIAVHLPV  480
GSVHAAAVPS VLHLVRRLGA KLVISVDRSG DRGELPFAAH LLQAFQSCAF LLESLDAVGT  540
EPDVASKIER FLIQPKIESC VMRRHQAAAA GDKLLPWRTM FTSAGFVPVH ISNFAEAQAD  600
SLLKKVPVRG FRVEKRAGSL VLHWQRAELV SVSAWRC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G00150.12e-83GRAS family protein