PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5AG077510.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HSF
Protein Properties Length: 274aa    MW: 30356.3 Da    PI: 6.9548
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5AG077510.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind103.91.3e-32211122102
                       HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXX CS
      HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkell 94 
                       F+ k+y +++d++++ ++ w   +nsfvv d+ +f++ +Lp +Fkhsnf+SFvRQLn+YgF+kv+ ++         weF+h sF +g+++ll
  TRIDC5AG077510.2  21 FVAKTYAMVDDPATDAVVAWGPASNSFVVADPFSFSRALLPAHFKHSNFSSFVRQLNTYGFRKVDPDR---------WEFAHASFLRGQTHLL 104
                       9********************999*****************************************999.........**************** PP

                       XXXXXXXX CS
      HSF_DNA-bind  95 ekikrkks 102
                       ++i r++s
  TRIDC5AG077510.2 105 TRIVRRRS 112
                       ****9986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 274 aa     Download sequence    
MSSAGMECSG SEGGGGMVAP FVAKTYAMVD DPATDAVVAW GPASNSFVVA DPFSFSRALL  60
PAHFKHSNFS SFVRQLNTYG FRKVDPDRWE FAHASFLRGQ THLLTRIVRR RSGGKRGKED  120
ADEEDEDISS KMLAMEVVRL KEEQRATEDR LATMWRRVQD AERRPKLMLA FLLKVVGDPD  180
VLRRLVGNSG GGCGLFPGEG AEAKRPRLLL DGEAQMGKKK MRVDGDGLLY DINRQEAFVR  240
EPRVNFTGFY TGGDGFSEVP VDDPPYAFRM DGGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24520.18e-64HSF family protein