PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG000060.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family M-type_MADS
Protein Properties Length: 78aa    MW: 8730.24 Da    PI: 11.3379
Description M-type_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG000060.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF89.51.7e-281059251
                      ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      rie  snrqvtfskRr+g+lKKA EL +LCd++v vi+fsstg+lyey+s
  TRIDC5BG000060.1 10 RIEKMSNRQVTFSKRRHGLLKKARELAILCDVQVGVIVFSSTGRLYEYAS 59
                      8***********************************************86 PP
Sequence ? help Back to Top
Protein Sequence    Length: 78 aa     Download sequence    
MARGKIVIRR IEKMSNRQVT FSKRRHGLLK KARELAILCD VQVGVIVFSS TGRLYEYASS  60
TTSASTGMPS IIHKYQSA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.22e-28MIKC_MADS family protein