PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG000070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family MIKC_MADS
Protein Properties Length: 232aa    MW: 26345.1 Da    PI: 9.9938
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG000070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF82.13.6e-26959151
                      S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
            SRF-TF  1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                      +ri+n  nrqvtfskRr g++KKA EL +LCda+ a+iifsstg+ly ++s
  TRIDC5BG000070.1  9 ERIDNAANRQVTFSKRRGGLMKKARELAILCDADLALIIFSSTGRLYNFAS 59
                      69***********************************************86 PP
2K-box70.84.1e-2482171998
             K-box   9 leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkl 98 
                       + +++a+ +q+e++ L+++++nLq+++R+llGe+L+  ++++Lq L +q+e sl ++R++K++++ e+i+el +k   +q+en +L kkl
  TRIDC5BG000070.1  82 NPTSEAKLWQREVTTLRQQVQNLQHNNRQLLGEELSGSTVRDLQFLVNQVEMSLHSVRKRKEQVIAEEIHELNQKGFLIQKENIELGKKL 171
                       67789999******************************************************************************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 232 aa     Download sequence    
MGRGKIAIER IDNAANRQVT FSKRRGGLMK KARELAILCD ADLALIIFSS TGRLYNFASS  60
SGMEAILERY QEAKQEHCGV LNPTSEAKLW QREVTTLRQQ VQNLQHNNRQ LLGEELSGST  120
VRDLQFLVNQ VEMSLHSVRK RKEQVIAEEI HELNQKGFLI QKENIELGKK LSIAHKRNIE  180
LQKKLSGVMR TSEQQASGSS SKAAAGLLLS TRAREPRIFI DLELRQQEHE DE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G57230.16e-62MIKC_MADS family protein