PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG003960.3

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

YABBY

Protein Properties

Length: 194aa MW: 21830.3 Da PI: 10.4068

Description

YABBY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG003960.3	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	YABBY	133.2	3.4e-41	84	167	88	170
YABBY 88 keesastsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170 +++s+s++ ++ ++ + ++++ + + rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl TRIDC5BG003960.3 84 SSSSSSSKFRMPTMMFSPQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 167 344455555555565555555555544479****************************************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence
VVGPDHTGRR SLLRALQLLQ HRTRGECPWE QHAQHRDSPV RALHKPAFGE PERADESSLS 60 KPNGSNGFIR DHGSVYNSPE FGSSSSSSSS KFRMPTMMFS PQNDLLQEQT LHARPPEKRQ 120 RVPSAYNRFI KEEIRRIKAN NPDISHREAF STAAKNWAHY PNIHFGLNPE RDGGKRLAVD 180 DAAPAAKKIQ GFCS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G26580.1	2e-35	YABBY family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG003960.3