PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG003960.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family YABBY
Protein Properties Length: 191aa    MW: 21085.7 Da    PI: 9.0296
Description YABBY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG003960.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1YABBY227.92.5e-7091786170
             YABBY   6 sseqvCyvqCnfCntilavsvPstslfkvvtvrCGhCtsllsvnlakasqll..aaeshldeslkee..lleelkveeenlksnv..ekeesa 92 
                        +e+vCyv+CnfCnt+lavsvP +s++++vtvrCGhCt+llsv+l+ +++    +a ++   sl ++       +++++ ++s +  ++++s+
  TRIDC5BG003960.4   9 PAEEVCYVHCNFCNTVLAVSVPGNSMLNIVTVRCGHCTNLLSVSLRGQMHSPvpPAAQE--SSLSKPngSNGFIRDHGSVYNSPEfgSSSSSS 99 
                       6899*****************************************98886531133333..33332224333345555555544311334444 PP

             YABBY  93 stsvsseklsenedeevprvpp.virPPekrqrvPsaynrfikeeiqrikasnPdishreafsaaaknWahfPkihfgl 170
                       s++ ++ ++  + ++++ + +    rPPekrqrvPsaynrfikeei+rika+nPdishreafs+aaknWah+P+ihfgl
  TRIDC5BG003960.4 100 SSKFRMPTMMFSPQNDLLQEQTlHARPPEKRQRVPSAYNRFIKEEIRRIKANNPDISHREAFSTAAKNWAHYPNIHFGL 178
                       4455555555555555555544479****************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 191 aa     Download sequence    
MSSSGQITPA EEVCYVHCNF CNTVLAVSVP GNSMLNIVTV RCGHCTNLLS VSLRGQMHSP  60
VPPAAQESSL SKPNGSNGFI RDHGSVYNSP EFGSSSSSSS SKFRMPTMMF SPQNDLLQEQ  120
TLHARPPEKR QRVPSAYNRF IKEEIRRIKA NNPDISHREA FSTAAKNWAH YPNIHFGLNP  180
ERDGGKRLAV D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G26580.19e-60YABBY family protein