PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG004350.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 834aa MW: 95720.3 Da PI: 8.1616

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG004350.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	63	8.8e-20	199	280	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 fY++YA +GF ++++++++ +k++ C+++gk+++ ++ +++r+ ++ +rt+C+ak+ vk++ +g+we +++++eHnH+l+p TRIDC5BG004350.1 199 FYSTYALLTGFVAKRNSNYRR------KKYHIECNRSGKPTPARNP-NRKRKINSFERTNCQAKVIVKLT-KGQWEFATVRNEHNHPLCP 280 9**************9999......5789*******9998.9******************.9**************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 834 aa Download sequence
SSPLHRRAAP LGSCGPASRM VTELDKPGAE TADNSTKKRR TCRVADDQGS PVPELHRKKA 60 SKNAAETMSS ASELSKEPVG KQSMTEERPE PTGDSYEELS SDSIEKNTDG VLADEADKET 120 NSVDHSLQQA EEQNQLHDNV ENIEMVNRNP SESDSDSSSG SDSDSELGKY FYPKFEELEA 180 ARKPEPGMKF QTLEDANGFY STYALLTGFV AKRNSNYRRK KYHIECNRSG KPTPARNPNR 240 KRKINSFERT NCQAKVIVKL TKGQWEFATV RNEHNHPLCP NPSLARFFLS QKHMSSEEKS 300 FLKVLQQCKI PPSKILRIFR RMRSSFGNIS FKKQGPVSSA RSSSENIPSK KKDPVSLQCT 360 EQRKTENSDV ESALKHFKEL ELRNPSFFYI KQTDEDNVVR SIFWTDARSR MDYDIFGDFI 420 SVDTTYTTNR HNLPVATIIG INNHGRTLLL GCALLRDGRA ETFKWMFQTL LQVMGGKIPG 480 SIITNQDEPL GRAIAEVLPQ VRLRFWKCDV MGKAHERIAA FMAARGNIKL ELDSLVDNSL 540 TEMEFEEGWS SLIERYDASK NEYLQFMWRI RKIWAPVYFR QDFYPFAESL GRGEGMNIVL 600 FRNYVLPKDR IEKFIERYEE IQKTTLKTDD EDRRQARTVP SCFSLQPIEK HASTIYTRQI 660 FLKVQRELLH STAFDVQVVK KGSVYRLERA FNYENPEFDR NAFEVFVDPV SNTFICQCAK 720 FARDRLLCCH IFRLFTQLGI NEIPAQYIVP RWTDKFKEEK AKQYTEKCLE KADSTARYEM 780 LMSKMADLSK KICSDGAKCN TFMLEFDSIQ EKLLATEGEN PRNSDNCMEI ITTS

Sequence ? help Back to Top

Protein Sequence Length: 834 aa Download sequence

SSPLHRRAAP LGSCGPASRM VTELDKPGAE TADNSTKKRR TCRVADDQGS PVPELHRKKA  60
SKNAAETMSS ASELSKEPVG KQSMTEERPE PTGDSYEELS SDSIEKNTDG VLADEADKET  120
NSVDHSLQQA EEQNQLHDNV ENIEMVNRNP SESDSDSSSG SDSDSELGKY FYPKFEELEA  180
ARKPEPGMKF QTLEDANGFY STYALLTGFV AKRNSNYRRK KYHIECNRSG KPTPARNPNR  240
KRKINSFERT NCQAKVIVKL TKGQWEFATV RNEHNHPLCP NPSLARFFLS QKHMSSEEKS  300
FLKVLQQCKI PPSKILRIFR RMRSSFGNIS FKKQGPVSSA RSSSENIPSK KKDPVSLQCT  360
EQRKTENSDV ESALKHFKEL ELRNPSFFYI KQTDEDNVVR SIFWTDARSR MDYDIFGDFI  420
SVDTTYTTNR HNLPVATIIG INNHGRTLLL GCALLRDGRA ETFKWMFQTL LQVMGGKIPG  480
SIITNQDEPL GRAIAEVLPQ VRLRFWKCDV MGKAHERIAA FMAARGNIKL ELDSLVDNSL  540
TEMEFEEGWS SLIERYDASK NEYLQFMWRI RKIWAPVYFR QDFYPFAESL GRGEGMNIVL  600
FRNYVLPKDR IEKFIERYEE IQKTTLKTDD EDRRQARTVP SCFSLQPIEK HASTIYTRQI  660
FLKVQRELLH STAFDVQVVK KGSVYRLERA FNYENPEFDR NAFEVFVDPV SNTFICQCAK  720
FARDRLLCCH IFRLFTQLGI NEIPAQYIVP RWTDKFKEEK AKQYTEKCLE KADSTARYEM  780
LMSKMADLSK KICSDGAKCN TFMLEFDSIQ EKLLATEGEN PRNSDNCMEI ITTS

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	37	62	KKRRTCRVADDQGSPVPELHRKKASK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G15090.1	2e-72	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG004350.1