PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG004480.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 336aa    MW: 36413 Da    PI: 8.4635
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG004480.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA927.7e-29174227158
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                       d+p+YVNaKQy++Il+RR +Rak+e+e++l     kpylheSRh hA+rR+RgsgGrF
  TRIDC5BG004480.1 174 DAPIYVNAKQYEGILRRRRARAKAEKENRL----VKPYLHESRHLHAMRRARGSGGRF 227
                       68****************************....9**********************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MMSFKNHHEG FAGQQLLAAA AAAASQVSGG APLPWWVGSQ LLYGEPMGHG KAPPAVPMSM  60
SPPEDACRDG QFQVVPRAQA LLDAVPLPMG ERGIPEALKF SMAHGKGGNS SEHSAPITLQ  120
SPFTEYNDHF ELGLGQSVIS SNYYSDQQYG LLSSYGMRSA SSGRMLIPLN MPADAPIYVN  180
AKQYEGILRR RRARAKAEKE NRLVKPYLHE SRHLHAMRRA RGSGGRFLNT KKETNGKDTG  240
VGSKAMAGNP LMRPAASLSS EIQHSEQGNR SSVSSLSGSE VTSLYDHEDV DHYHNFEHLR  300
THFFTPLPSI MDGEHGAGNP FKWAAASDGC CNLLKA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.37e-29NF-YA family protein