PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG004480.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 103aa    MW: 11369.7 Da    PI: 9.3336
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG004480.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA42.12.9e-1376103128
         CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeek 28 
                       d+p+YVNaKQy++Il+RR +Rak+e+e+
  TRIDC5BG004480.2  76 DAPIYVNAKQYEGILRRRRARAKAEKEN 103
                       68***********************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 103 aa     Download sequence    
MVHLGSGKGG NSSEHSAPIT LQSPFTEYND HFELGLGQSV ISSNYYSDQQ YGLLSSYGMR  60
SASSGRMLIP LNMPADAPIY VNAKQYEGIL RRRRARAKAE KEN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G05690.13e-11NF-YA family protein