PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG005070.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 261aa    MW: 28407.5 Da    PI: 6.9646
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG005070.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP102.47.7e-3211395101
               TCP   5 kdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssaseceaes 77 
                       kdrhsk+ T++g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++                    +           
  TRIDC5BG005070.1   1 KDRHSKVVTSRGLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfafpvaspaaedtaevsT----------- 82 
                       8************************************************************998866663333333322220........... PP

               TCP  78 ssssasnsssg......................................kaaksaakskksq 101
                            s+ s+g                                      +aa + ++++++q
  TRIDC5BG005070.1  83 -----SETSKGsvlslangpadndnaahqasaynggsangmfagllhcsNAADKPMQHQHQQ 139
                       .....222222233344444444444444555556666666777755532222222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 261 aa     Download sequence    
KDRHSKVVTS RGLRDRRIRL SVQTAIQFYD IQDRLGVDQP SKAIEWLIQA AATAIDGLPS  60
LDCSFAFPVA SPAAEDTAEV STSETSKGSV LSLANGPADN DNAAHQASAY NGGSANGMFA  120
GLLHCSNAAD KPMQHQHQQQ QPTLAYYAAP GSHIAPMSFE MIPQLTFSQD QQHCHHHHHH  180
HHASVSFDRS TLQSNTVSTP QWPPSQHPFL MQRFSAAPAE PSPMFPFFLG GNNAAAAAAP  240
AAANAPERRL QLWDFKEERK T
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.21e-28TCP family protein