PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG005070.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 233aa    MW: 25101.7 Da    PI: 6.2131
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG005070.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP431.7e-13111233102
               TCP  33 FdLqdeLGfdkdsktieWLlqqakpaikeltgt....................ssssaseceaesssssasnsssg................. 88 
                       +d+qd+LG+d++sk+ieWL+q+a +ai+ l+++                    +                s+ s+g                 
  TRIDC5BG005070.3   1 YDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfafpvaspaaedtaevsT----------------SETSKGsvlslangpadndnaah 77 
                       89*******************************998866663333333322220................22222223334444444444444 PP

               TCP  89 .....................kaaksaakskksqk 102
                                            +aa + ++++++q+
  TRIDC5BG005070.3  78 qasaynggsangmfagllhcsNAADKPMQHQHQQQ 112
                       45555566666667777555322222222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 233 aa     Download sequence    
YDIQDRLGVD QPSKAIEWLI QAAATAIDGL PSLDCSFAFP VASPAAEDTA EVSTSETSKG  60
SVLSLANGPA DNDNAAHQAS AYNGGSANGM FAGLLHCSNA ADKPMQHQHQ QQQPTLAYYA  120
APGSHIAPMS FEMIPQLTFS QDQQHCHHHH HHHHASVSFD RSTLQSNTVS TPQWPPSQHP  180
FLMQRFSAAP AEPSPMFPFF LGGNNAAAAA APAAANAPER RLQLWDFKEE RKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18390.18e-12TCP family protein