PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG005070.4
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family TCP
Protein Properties Length: 300aa    MW: 32485 Da    PI: 7.282
Description TCP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG005070.4genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1TCP106.54e-33361781101
               TCP   1 aagkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgt...................ssssasece 74 
                       aag+kdrhsk+ T++g+RdRR+Rls+++a++f+d+qd+LG+d++sk+ieWL+q+a +ai+ l+++                   s        
  TRIDC5BG005070.4  36 AAGGKDRHSKVVTSRGLRDRRIRLSVQTAIQFYDIQDRLGVDQPSKAIEWLIQAAATAIDGLPSLdcsfafpvaspaaedtaevS-------- 120
                       6899*************************************************************99886665333333322220........ PP

               TCP  75 aesssssasnsssg......................................kaaksaakskksq 101
                              +s+ s+g                                      +aa + ++++++q
  TRIDC5BG005070.4 121 -------TSETSKGsvlslangpadndnaahqasaynggsangmfagllhcsNAADKPMQHQHQQ 178
                       .......2222222233344444444444444555556666666677755532222222222222 PP
Sequence ? help Back to Top
Protein Sequence    Length: 300 aa     Download sequence    
MEEADKDRNS CKRLRAVGGG GDSADAWRSF RVARAAAGGK DRHSKVVTSR GLRDRRIRLS  60
VQTAIQFYDI QDRLGVDQPS KAIEWLIQAA ATAIDGLPSL DCSFAFPVAS PAAEDTAEVS  120
TSETSKGSVL SLANGPADND NAAHQASAYN GGSANGMFAG LLHCSNAADK PMQHQHQQQQ  180
PTLAYYAAPG SHIAPMSFEM IPQLTFSQDQ QHCHHHHHHH HASVSFDRST LQSNTVSTPQ  240
WPPSQHPFLM QRFSAAPAEP SPMFPFFLGG NNAAAAAAPA AANAPERRLQ LWDFKEERKT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30210.27e-32TCP family protein