PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG006010.1
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YB
Protein Properties Length: 104aa    MW: 11440 Da    PI: 4.4458
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG006010.1genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB32.42.2e-10391002687
             NF-YB  26 kiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvyl 87 
                        + kda     e    fi  +++ a+d c+  kr+ in++d++ al ++ f ++vepl++ l
  TRIDC5BG006010.1  39 IVNKDAMAAFAEGTHIFIHHLSDMANDVCNDGKRQMINAEDVFKALDEIEFPKFVEPLRTEL 100
                       467899999999999*******************************************8766 PP
Sequence ? help Back to Top
Protein Sequence    Length: 104 aa     Download sequence    
MTEAEVEELP KAIVRRLIKA KLARATSGSE GAEGGVEVIV NKDAMAAFAE GTHIFIHHLS  60
DMANDVCNDG KRQMINAEDV FKALDEIEFP KFVEPLRTEL EDLG
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27470.13e-26NF-YB family protein