PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG007750.3
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family NF-YA
Protein Properties Length: 125aa    MW: 13678.2 Da    PI: 10.6443
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG007750.3genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA105.83.7e-332177158
         CBFB_NFYA  1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58
                      +ep+YVNaKQy++Il+RRq+Rak+e+e+kl +k+rkpylheSRh+hAl+R+Rg gGrF
  TRIDC5BG007750.3 21 EEPVYVNAKQYNAILRRRQSRAKAESERKL-IKGRKPYLHESRHQHALKRARGAGGRF 77
                      69****************************.**************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 125 aa     Download sequence    
MHPPMVGMHA AAIPLPTDAI EEPVYVNAKQ YNAILRRRQS RAKAESERKL IKGRKPYLHE  60
SRHQHALKRA RGAGGRFLNA KSDDNEEHSD SSSKDKQNGA APRSSGQSSQ SPKGATSADK  120
SGNHE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30500.22e-36NF-YA family protein