PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG007760.5
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family HD-ZIP
Protein Properties Length: 414aa    MW: 45415 Da    PI: 9.4161
Description HD-ZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG007760.5genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox58.98.6e-1980137457
                       -SS--HHHHHHHHHHHHHSSS--HHHHHHHHHHC....TS-HHHHHHHHHHHHHHHHC CS
          Homeobox   4 RttftkeqleeLeelFeknrypsaeereeLAkkl....gLterqVkvWFqNrRakekk 57 
                         ++t+eq+e+Le++++++++ps  +r+++ + +    +++ +q+kvWFqNrR +ek+
  TRIDC5BG007760.5  80 YVRYTPEQVEALERVYNECPKPSSLRRQQIIRDCpilcNIEPKQIKVWFQNRRCREKQ 137
                       6789****************************************************97 PP
2START137.11.9e-432304044173
                       HHHHHHHHHHHHHC-TT-EEEEEXCCTTEEEEEEESSS.SCEEEEEEEECCSCHHHHHHHHHCCCGGCT-TT-SEEEEEEEECTT..EEEEEE CS
             START   4 eeaaqelvkkalaeepgWvkssesengdevlqkfeeskvdsgealrasgvvdmvlallveellddkeqWdetlakaetlevissg..galqlm 94 
                       ee+++++++ka+ ++  Wv++  +++g++++ +++ s+++ g a+ra+g+v  +++  v+e+l+d++ W ++++ +++l v  +g  g+++l+
  TRIDC5BG007760.5 230 EETLTAFLSKATGTAVEWVQMMGMKPGPDSIGIIAVSHNCIGVAARACGLVSLEPT-KVAEILKDRPSWYRDCRCVDILHVFPTGngGTIELI 321
                       68899***************************************************.8888888888************************** PP

                       EEXXTTXX-SSX.EEEEEEEEEEE.TTS-EEEEEEEEE-TTS--....-TTSEE-EESSEEEEEEEECTCEEEEEEEE-EE-- CS
             START  95 vaelqalsplvp.RdfvfvRyirqlgagdwvivdvSvdseqkppe...sssvvRaellpSgiliepksnghskvtwvehvdlk 173
                       +++++a+++l++ Rdf+++Ry+  l +g++vi+++S+++ +  p+   +++++Rae+lpSg+li+p+++g+s +++v+hvdl+
  TRIDC5BG007760.5 322 YMQTYAPTTLAApRDFWTLRYTCGLDDGSLVICERSLTQSTGGPSgpnTPGFIRAEVLPSGYLIRPCEGGGSMIHIVDHVDLD 404
                       **********999****************************9999999*********************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 414 aa     Download sequence    
PKKPESERHG DPPQRSTPRS LLSLSQAMTR HRPWPPSHPP PPPHPLRVTA AAAATGTDAG  60
KKMARLSPGA AAPQVDTGKY VRYTPEQVEA LERVYNECPK PSSLRRQQII RDCPILCNIE  120
PKQIKVWFQN RRCREKQRKE SSRMQTVNRK LTAMNKLLME ENDRLQKQVS RLVYENASVK  180
SLKTKIHKAS AATTDTSCES VVTSGQQQAL AAPRPQRDAN NPAGLLAIGE ETLTAFLSKA  240
TGTAVEWVQM MGMKPGPDSI GIIAVSHNCI GVAARACGLV SLEPTKVAEI LKDRPSWYRD  300
CRCVDILHVF PTGNGGTIEL IYMQTYAPTT LAAPRDFWTL RYTCGLDDGS LVICERSLTQ  360
STGGPSGPNT PGFIRAEVLP SGYLIRPCEG GGSMIHIVDH VDLDVSNKNG FHIT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G30490.11e-177HD-ZIP family protein