PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG007960.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

FAR1

Protein Properties

Length: 801aa MW: 91969.4 Da PI: 5.0768

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG007960.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	78.7	1.1e-24	95	182	2	91
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 Y+eY++++GFsvrk k+++ + ++ i +++++Cskeg +++e+ + +++ +++etrt+Cka+++ + +++g+w+v+++ eHnHel+p TRIDC5BG007960.1 95 LYCEYGHRMGFSVRKGKQYYFTGTKVIRTKDYYCSKEGLKDDEQLT--EANFNKPETRTNCKAMVRFRVDSEGQWRVIQIIPEHNHELVP 182 7***************************************9988..9999**********************************86 PP

Sequence ? help Back to Top
Protein Sequence Length: 801 aa Download sequence
MEGTSVPIEI DGDAICLENV GDDEHEAQES GQVQIIYATE NGAQVAFDSQ EQGTEEHSVR 60 SEEDQENNSV IPSREEFTEE LRTKVAYSEE QAYRLYCEYG HRMGFSVRKG KQYYFTGTKV 120 IRTKDYYCSK EGLKDDEQLT EANFNKPETR TNCKAMVRFR VDSEGQWRVI QIIPEHNHEL 180 VPPEEIHLLR SVRILSIPKP GTLNAMVNAE IQSMHDSLHV HDDGAECHSQ VSIQSYALLE 240 PEDAEALVGY LKRRTIEQGM FYWDVQVDQE GQMTNFFWRD GRSRVDYDCF GDVVVFDTSY 300 RTNKYNMICA PFVGINHHMQ NVMFGCAFML DESLTSYEWL LKSFLESMGG CPPKTIFTDQ 360 NDTISKAIEV ILPETRHCLC QWHIEKNLQA HLDTPNASGT FHSMFMKCMK DCESEAEFEE 420 TWAMMLQEHN LQDDQWLTDL FEQRHKWCTA LHKVAFDCGI RSLDRNFSSH NVLGSIADES 480 TSPTNFALEF DKLVGSWRTN ESVDDIQCKQ ISPECSVKQN SILQHAAEVY THKVYKSLET 540 EFLDGCTGTS YQEMQCSETL YRFEFIMQSS PKVWIVFLDT STMELSCSCK KFEMMGILCS 600 HALNALGLKN LDKIPESYVL KRWTKYVRKG TYVFPSDQSP EQDCTEAVLA YRNRAMWFVY 660 DLLMKSKGHQ DTRKLILDVL ENGEKSLESV CELKRMHIHP SGKDKDASKA EKRKKKLSKQ 720 DKNSRNVKQV VLPPPAESVF VDQPNQNQYF ATEDIATNSS IGRPFFYQEY PATGVSASQI 780 EGHAKYPFRA SVCTSTTGNF R

Sequence ? help Back to Top

Protein Sequence Length: 801 aa Download sequence

MEGTSVPIEI DGDAICLENV GDDEHEAQES GQVQIIYATE NGAQVAFDSQ EQGTEEHSVR  60
SEEDQENNSV IPSREEFTEE LRTKVAYSEE QAYRLYCEYG HRMGFSVRKG KQYYFTGTKV  120
IRTKDYYCSK EGLKDDEQLT EANFNKPETR TNCKAMVRFR VDSEGQWRVI QIIPEHNHEL  180
VPPEEIHLLR SVRILSIPKP GTLNAMVNAE IQSMHDSLHV HDDGAECHSQ VSIQSYALLE  240
PEDAEALVGY LKRRTIEQGM FYWDVQVDQE GQMTNFFWRD GRSRVDYDCF GDVVVFDTSY  300
RTNKYNMICA PFVGINHHMQ NVMFGCAFML DESLTSYEWL LKSFLESMGG CPPKTIFTDQ  360
NDTISKAIEV ILPETRHCLC QWHIEKNLQA HLDTPNASGT FHSMFMKCMK DCESEAEFEE  420
TWAMMLQEHN LQDDQWLTDL FEQRHKWCTA LHKVAFDCGI RSLDRNFSSH NVLGSIADES  480
TSPTNFALEF DKLVGSWRTN ESVDDIQCKQ ISPECSVKQN SILQHAAEVY THKVYKSLET  540
EFLDGCTGTS YQEMQCSETL YRFEFIMQSS PKVWIVFLDT STMELSCSCK KFEMMGILCS  600
HALNALGLKN LDKIPESYVL KRWTKYVRKG TYVFPSDQSP EQDCTEAVLA YRNRAMWFVY  660
DLLMKSKGHQ DTRKLILDVL ENGEKSLESV CELKRMHIHP SGKDKDASKA EKRKKKLSKQ  720
DKNSRNVKQV VLPPPAESVF VDQPNQNQYF ATEDIATNSS IGRPFFYQEY PATGVSASQI  780
EGHAKYPFRA SVCTSTTGNF R

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	5e-82	FAR1 family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG007960.1