PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID TRIDC5BG009110.2
Organism
Triticum dicoccoides
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum
Family bHLH
Protein Properties Length: 179aa    MW: 19980.8 Da    PI: 10.5029
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
TRIDC5BG009110.2genomeEnsemblPlantsView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH54.32.5e-1785132355
                       HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
               HLH   3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                       + hn  ErrRRdriN+++  L+el+P++      K +Ka++L +A+eY+ksLq
  TRIDC5BG009110.2  85 QVHNLSERRRRDRINEKMRALQELVPHC-----NKTDKASMLDEAIEYLKSLQ 132
                       57*************************8.....6******************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 179 aa     Download sequence    
VSDTARDDTV LLPRSGREAR DARSYLSVSA TLTSSSTWSR PSGTSKRKLS EVPSEVMQDV  60
ESDSADVTCE TARKPTTAKR RRAAQVHNLS ERRRRDRINE KMRALQELVP HCNKTDKASM  120
LDEAIEYLKS LQLQLQLMWA MGGRMALAPA PVMFPAGAHQ YMQRMAAISS RMPPFTTGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
17995KRRRAAQVHNLSERRRR
28096KRRRAAQVHNLSERRRR
39196ERRRRD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G09530.23e-32bHLH family protein