PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG009760.16

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

bZIP

Protein Properties

Length: 299aa MW: 32594.2 Da PI: 5.0166

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG009760.16	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	43.4	7.4e-14	112	161	8	60
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 8 rrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 +r+ +NRe+ArrsR+RK+a + e v +L a N +L k+l +++++ k TRIDC5BG009760.16 112 KRMLSNRESARRSRKRKQAHQNDIESQVTQLRADNASLLKRLTDMTQKY---K 161 8**********************************99985555555544...4 PP

Sequence ? help Back to Top
Protein Sequence Length: 299 aa Download sequence
MECSGDEVVE LNCARAGGDP GEYAAVLKRK LQLYCAAVAK TMEAKPQESS LNCLNSQASD 60 TSPLVSQASF DGDGTVVQGK PANSCTSKEQ SDDDDGDLEE NTDPLNGSGQ VKRMLSNRES 120 ARRSRKRKQA HQNDIESQVT QLRADNASLL KRLTDMTQKY KEAFLGNRNL TVDIETMRRK 180 VNIAEEAVRR VTGASLMFST TSNRAPLASC VSVAASADAA PAEESMSHFL QGLLEDDMIK 240 HDLSEVATPL PNGEEMTSRP APLRRVASLE NLQKRIHRDS VHSEDTSIFS DHEVPANAQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	122	128	RRSRKRK
2	122	129	RRSRKRKQ
3	124	129	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G28770.2	2e-27	bZIP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG009760.16