PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010230.2

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 335aa MW: 37479.1 Da PI: 7.6334

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010230.2	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	25.7	2.2e-08	19	52	3	40
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40 +++C+Ckks YC Cfa+g++Cse C C+ C Nk TRIDC5BG010230.2 19 CRTCSCKKS----SYCVCFASGSQCSELCGCDPCYNKP 52 678999999....7**********************96 PP
2	TCR	45.5	1.5e-14	91	126	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5BG010230.2 91 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 126 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 335 aa Download sequence
ANGSSDRKKK RKAEDGEGCR TCSCKKSSYC VCFASGSQCS ELCGCDPCYN KPIHGVQQNT 60 PPGLPLQVVR PAEAGQNSTE FARYQMDFFR RKCTCKKSGC LKKYCDCYQG GAGCSINCKC 120 DDCKNPYGKK VGVILDGKSI LATPTPGPTP IERNGTEVIS SDDDDDDEDD YYMNRPLSPI 180 PPSPVSRESS FQQETLVGVE VHTVNGHLYP KPLTQVRPET WQLSRRPAEE ARGEQWRYMR 240 RPSEDGTSDA MEGHADPKFH HQRDNNNSKQ RESPADNRFS IPRCIEVMNG MADLSPVDKS 300 LAPDVFLDPS NREIFLSLSV DIRTMWLKRK MRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	7e-33	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010230.2