PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010230.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 357aa MW: 40381.1 Da PI: 6.7302

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010230.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	26.9	9.8e-09	49	74	15	40
TCR 15 kkYCeCfaagkkCseeCkCedCkNke 40 + YC Cfa+g++Cse C C+ C Nk TRIDC5BG010230.5 49 RTYCVCFASGSQCSELCGCDPCYNKP 74 68**********************96 PP
2	TCR	45.4	1.7e-14	113	148	4	39
TCR 4 kgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++C+Ckks ClkkYC+C++ g+ Cs +CkC+dCkN TRIDC5BG010230.5 113 RKCTCKKSGCLKKYCDCYQGGAGCSINCKCDDCKNP 148 79*********************************6 PP

Sequence ? help Back to Top
Protein Sequence Length: 357 aa Download sequence
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXCM EKMGNANFRT YCVCFASGSQ 60 CSELCGCDPC YNKPIHGVQQ NTPPGLPLQV VRPAEAGQNS TEFARYQMDF FRRKCTCKKS 120 GCLKKYCDCY QGGAGCSINC KCDDCKNPYG KKVGVILDGK SILATPTPGP TPIERNGTEV 180 ISSDDDDDDE DDYYMNRPLS PIPPSPVSRE SSFQQETLVG VEVHTVNGHL YPKPLTQVRP 240 ETWQLSRRPA EEARGEQWRY MRRPSEDGTS DAMEGHADPK FHHQRDNNNS KQRESPADNR 300 FSIPRCIEVM NGMADLSPVD KSLAPDVFLD PSNREIFLSL SVDIRTMWLK RKMRSLV

Sequence ? help Back to Top

Protein Sequence Length: 357 aa Download sequence

XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXCM EKMGNANFRT YCVCFASGSQ  60
CSELCGCDPC YNKPIHGVQQ NTPPGLPLQV VRPAEAGQNS TEFARYQMDF FRRKCTCKKS  120
GCLKKYCDCY QGGAGCSINC KCDDCKNPYG KKVGVILDGK SILATPTPGP TPIERNGTEV  180
ISSDDDDDDE DDYYMNRPLS PIPPSPVSRE SSFQQETLVG VEVHTVNGHL YPKPLTQVRP  240
ETWQLSRRPA EEARGEQWRY MRRPSEDGTS DAMEGHADPK FHHQRDNNNS KQRESPADNR  300
FSIPRCIEVM NGMADLSPVD KSLAPDVFLD PSNREIFLSL SVDIRTMWLK RKMRSLV

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-27	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010230.5