PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010270.1

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 548aa MW: 58528.1 Da PI: 8.2188

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010270.1	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.9	6.2e-16	239	278	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5BG010270.1 239 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 278 689**********************************976 PP
2	TCR	51.1	2.6e-16	324	362	1	39
TCR 1 kekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39 ++k+gCnCkks+ClkkYCeC++ g+ Cs +C+Ce+CkN TRIDC5BG010270.1 324 RHKRGCNCKKSSCLKKYCECYQGGVGCSISCRCEGCKNA 362 589***********************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 548 aa Download sequence
MDMLRLAPPC EADTQLVNET LNADNVFSGN SLLTDGPSGS YINNAAHDPN LYWDGTVEGP 60 TTDYTPQLLS GACQSQSVSN DQICNAVEEP SDHIPIDQSA LSQNMRGMRR RCLFNEKAGA 120 VNKAAKKTSD RHSANTTTPR CKTNSGDKPV RTPPCALPGI GLHLNALAPI STDKIVPQAA 180 QSTINQASNF PCAVSSSTAE PNIVNEDSSQ AIVVANADES GQGSPKKKRH KFDDGDGTSC 240 KRCSCKKSKC LKLYCECFHA GVFCSEPCSC QGCLNKPSNM EIVLSTREQI ESRNPLAFAP 300 KVIRTSEPGQ ELGEYPNKTP ASARHKRGCN CKKSSCLKKY CECYQGGVGC SISCRCEGCK 360 NAFGRREGLG PLSIEEAKQG NEENSACVKE EKKEDDNNQL VICPAANPAP AENVLTTPSA 420 MDVRPLASRP PSSSKRPRST TKALGHPSRL CNSQAPLKTD TLLSPFENYA EIMFGVGTSD 480 SLKGGLSPQT SVKVVSPNKK RVSPPRIGTG LSPICKSGRK LILKSIPSFP SLCGDVNNVD 540 TKTTSPAP

Sequence ? help Back to Top

Protein Sequence Length: 548 aa Download sequence

MDMLRLAPPC EADTQLVNET LNADNVFSGN SLLTDGPSGS YINNAAHDPN LYWDGTVEGP  60
TTDYTPQLLS GACQSQSVSN DQICNAVEEP SDHIPIDQSA LSQNMRGMRR RCLFNEKAGA  120
VNKAAKKTSD RHSANTTTPR CKTNSGDKPV RTPPCALPGI GLHLNALAPI STDKIVPQAA  180
QSTINQASNF PCAVSSSTAE PNIVNEDSSQ AIVVANADES GQGSPKKKRH KFDDGDGTSC  240
KRCSCKKSKC LKLYCECFHA GVFCSEPCSC QGCLNKPSNM EIVLSTREQI ESRNPLAFAP  300
KVIRTSEPGQ ELGEYPNKTP ASARHKRGCN CKKSSCLKKY CECYQGGVGC SISCRCEGCK  360
NAFGRREGLG PLSIEEAKQG NEENSACVKE EKKEDDNNQL VICPAANPAP AENVLTTPSA  420
MDVRPLASRP PSSSKRPRST TKALGHPSRL CNSQAPLKTD TLLSPFENYA EIMFGVGTSD  480
SLKGGLSPQT SVKVVSPNKK RVSPPRIGTG LSPICKSGRK LILKSIPSFP SLCGDVNNVD  540
TKTTSPAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	9e-77	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010270.1