PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010270.5

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 576aa MW: 62496.8 Da PI: 6.7522

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010270.5	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	49.8	6.6e-16	456	495	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5BG010270.5 456 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 495 689**********************************976 PP
2	TCR	33.1	1.1e-10	541	563	1	23
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkks+ClkkYCeC++ TRIDC5BG010270.5 541 RHKRGCNCKKSSCLKKYCECYQV 563 589******************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 576 aa Download sequence
MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDSSH NVHLFKSSDL APVSSIFASP 60 HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP 120 IDSSANRSNS TSKLPQTIQF VGDSLECGKN QSADGKKDLA RDQESIELEG VLLDHTGPDK 180 IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCEAD TQLVNETLNA 240 DNVFSGNSLL TDGPSGSYIN NAAHDPNLYW DGTVEGPTTD YTPQLLSGAC QSQSVSNDQI 300 CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT 360 NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQST INQASNFPCA VSSSTAEPNI 420 VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF 480 CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQELG EYPNKTPASA 540 RHKRGCNCKK SSCLKKYCEC YQVHTLIWFN IFYLAG

Sequence ? help Back to Top

Protein Sequence Length: 576 aa Download sequence

MDTPDRPRAG AAAGFEDSPV FNFINNLSPI PPPKPQDSSH NVHLFKSSDL APVSSIFASP  60
HVNPPKESKL LIRDDSVQLS QDSNSPNSVR TRLGSAIRLI KCKNIVSENC SFTCHLNQGP  120
IDSSANRSNS TSKLPQTIQF VGDSLECGKN QSADGKKDLA RDQESIELEG VLLDHTGPDK  180
IDSSQPGRIV HENQQCEQQK DGFTAYDGDY LITHESSMDM LRLAPPCEAD TQLVNETLNA  240
DNVFSGNSLL TDGPSGSYIN NAAHDPNLYW DGTVEGPTTD YTPQLLSGAC QSQSVSNDQI  300
CNAVEEPSDH IPIDQSALSQ NMRGMRRRCL FNEKAGAVNK AAKKTSDRHS ANTTTPRCKT  360
NSGDKPVRTP PCALPGIGLH LNALAPISTD KIVPQAAQST INQASNFPCA VSSSTAEPNI  420
VNEDSSQAIV VANADESGQG SPKKKRHKFD DGDGTSCKRC SCKKSKCLKL YCECFHAGVF  480
CSEPCSCQGC LNKPSNMEIV LSTREQIESR NPLAFAPKVI RTSEPGQELG EYPNKTPASA  540
RHKRGCNCKK SSCLKKYCEC YQVHTLIWFN IFYLAG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	4e-52	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010270.5