PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

TRIDC5BG010270.6

Organism

Triticum dicoccoides

Taxonomic ID

85692

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Triticinae; Triticum

Family

CPP

Protein Properties

Length: 496aa MW: 53731.8 Da PI: 6.5551

Description

CPP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
TRIDC5BG010270.6	genome	EnsemblPlants	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCR	50.1	5.5e-16	383	422	2	41
TCR 2 ekkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNkee 41 ++k+C+CkkskClk+YCeCf+ag++Cse C+C++C Nk + TRIDC5BG010270.6 383 SCKRCSCKKSKCLKLYCECFHAGVFCSEPCSCQGCLNKPS 422 689**********************************976 PP
2	TCR	31.7	3.1e-10	468	490	1	23
TCR 1 kekkgCnCkkskClkkYCeCfaa 23 ++k+gCnCkks+ClkkYCeC+++ TRIDC5BG010270.6 468 RHKRGCNCKKSSCLKKYCECYQR 490 589******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 496 aa Download sequence
DDSVQLSQDS NSPNSVRTRL GSAIRLIKCK NIVSENCSFT CHLNQGPIDS SANRSNSTSK 60 LPQTIQFVGD SLECGKNQSA DGKKDLARDQ ESIELEGVLL DHTGPDKIDS SQPGRIVHEN 120 QQCEQQKDGF TAYDGDYLIT HESSMDMLRL APPCEADTQL VNETLNADNV FSGNSLLTDG 180 PSGSYINNAA HDPNLYWDGT VEGPTTDYTP QLLSGACQSQ SVSNDQICNA VEEPSDHIPI 240 DQSALSQNMR GMRRRCLFNE KAGAVNKAAK KTSDRHSANT TTPRCKTNSG DKPVRTPPCA 300 LPGIGLHLNA LAPISTDKIV PQAAQSTINQ ASNFPCAVSS STAEPNIVNE DSSQAIVVAN 360 ADESGQGSPK KKRHKFDDGD GTSCKRCSCK KSKCLKLYCE CFHAGVFCSE PCSCQGCLNK 420 PSNMEIVLST REQIESRNPL AFAPKVIRTS EPGQELGEYP NKTPASARHK RGCNCKKSSC 480 LKKYCECYQR VAWDAP

Sequence ? help Back to Top

Protein Sequence Length: 496 aa Download sequence

DDSVQLSQDS NSPNSVRTRL GSAIRLIKCK NIVSENCSFT CHLNQGPIDS SANRSNSTSK  60
LPQTIQFVGD SLECGKNQSA DGKKDLARDQ ESIELEGVLL DHTGPDKIDS SQPGRIVHEN  120
QQCEQQKDGF TAYDGDYLIT HESSMDMLRL APPCEADTQL VNETLNADNV FSGNSLLTDG  180
PSGSYINNAA HDPNLYWDGT VEGPTTDYTP QLLSGACQSQ SVSNDQICNA VEEPSDHIPI  240
DQSALSQNMR GMRRRCLFNE KAGAVNKAAK KTSDRHSANT TTPRCKTNSG DKPVRTPPCA  300
LPGIGLHLNA LAPISTDKIV PQAAQSTINQ ASNFPCAVSS STAEPNIVNE DSSQAIVVAN  360
ADESGQGSPK KKRHKFDDGD GTSCKRCSCK KSKCLKLYCE CFHAGVFCSE PCSCQGCLNK  420
PSNMEIVLST REQIESRNPL AFAPKVIRTS EPGQELGEYP NKTPASARHK RGCNCKKSSC  480
LKKYCECYQR VAWDAP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G14770.1	3e-52	CPP family protein

Link Out ? help Back to Top
Ensembl	TRIDC5BG010270.6